CDS

Accession Number TCMCG006C30690
gbkey CDS
Protein Id XP_022545950.1
Location join(22478526..22478660,22478758..22478883,22479004..22479045,22479522..22479581,22479707..22479769,22480018..22480098,22480443..22480514,22480592..22480639,22480738..22480806,22480894..22481027,22481597..22481672,22482000..22482193,22482459..22482539,22482694..22482895,22482971..22483201,22483286..22483366,22483463..22483582,22483672..22483731,22484226..22484353,22484799..22484895,22484978..22485106,22485588..22485691,22485968..22486148,22486347..22486513,22486696..22487302,22487404..22487508,22488131..22488286,22488418..22488498,22488568..22488942,22489358..22489574,22489670..22490324,22490402..22490552,22490643..22490660,22490738..22490776)
Gene LOC106359234
GeneID 106359234
Organism Brassica napus

Protein

Length 1694aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022690229.1
Definition THO complex subunit 2 isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category K
Description Tho complex subunit
KEGG_TC -
KEGG_Module M00405        [VIEW IN KEGG]
M00406        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12879        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko03040        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000346        [VIEW IN EMBL-EBI]
GO:0000347        [VIEW IN EMBL-EBI]
GO:0000445        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035195        [VIEW IN EMBL-EBI]
GO:0035196        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1990428        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTCTTCCGCTACTTGAGTGTAAGTACGTGACGGAGGAGTTCGTTCGCGAAGGGAAGAGTGGCAGCTACGGTTCCAAGTTGCCCAGCTCGGTACCGATGCTTCGTTTCCTATACGAGCTTTGTTGGGTTTTGGTTCGTGGCGAGTTGCCGATTCAGAGCTGTAAGGCTGTGTTGGAGAAGGTGAAGTTTTTGGATGATCCGTCGAAGGAAGAGTTAGCTTCTTGTTTTGCGGATGTTGTGACTCAGATAGCTCAAGATCTTACTATGTCGGGGGATCACCGTTCTCGCCTAACAAAATTGGCAAAATGGCTTGTGGAATCACAGACAGTTCCTCAAAGGATTTTCCAAGAGCGTTGTGAGGAGGAGTTTTTATGGGAAGCTGAAATGGTTAAAATTAAAGCCCAAGATTTGAAGGGGAAAGAGGTGCGATTAAACACTCGTCTTCTGTACCAGCAGACAAAGTTCAACTTACTCCGTGAAGAAAGCGAGGGATATGCCAAATTGATTACCCTTTTATGCCGAGGATCTGCAGGTTCTTCGCATAATGCATCAGCAGCAACCATGGGAATTATCAAGTCATTAATTGGGCATTTTGACCTTGATCCGAACCGTGTTTTCGACATTGTGTTGGATTGCTTTGAACTTGAACAAGATTACGACACGTTTCTCAATCTAATTCCTATCTTTCCCAAGTCTCATGCTTCACAAATTCTTGGATTTAAATTTCAATACTATCAGAGATTGGAGGTGAATAGCCCAGTTCCATCTGGGCTCTATAAGCTTACGGCCTTGCTAGTAAAGAAGAATTTCATCAGTCTTGAAAGCATATATGCACATCTGCTACCTAAGGACGAAGAAGTTTTTGAGGATTATAATACTTATTCTGCAAAGCGTTTTGAAGAGGCCAATAATATTGGAAAGATAAATCTTGCTGCTACTGGGAAGGATCTTATGGAGGATGAGAAGCAAGGAGATTTCAAAGTTGATCTCTATGCTGCTTTAGACATGGAAACTGAAGCTGTTGCTGAGCGAATACCAGAGCTTGAAAATAATCAGACTCTGGGCCTCCTTGATGGTTTCCTCTCTGTGGACGACTGGAAACATGCCAATATCATGTTCGAGCGTCTTGCGCCTCTTAATCCGGTGGCTCACAATCATATATGTGATGGCTTGTTTAGGCTTATAGAGAAGAGAATCACTCATGCTTATCGCATTGCCCGTCAGACACGTTTTCAAAATTCTTCTTCTGCGAGTTCAGAAAAGATTGCCCACGCTGCTAATACAAGTGCCAGTAAAACTTGTCCAGATCTTAAAGAAGTGTTTCAGATACTTGTTACAGTTGGACCCTACTTGTACCGTAATACACAACTGCTGCAGAAGATTTGTAGACTATTAAGGGTTTACTACTTGTCGTCCTTAGATCTTGTTCGCAGTAGTGATGGGTCATCAAATCAAGAAGGTAGTGCAGATGAAATCAAGCACCTGAAGGAAGCTAGGTTTAGAGTGGAAGAAGCCCTTGGAACATGCCTTCTGCCATCGTTACAGTTAATACCTGCAAATCCAGCAGTTGGTCATGAGATTTGGGAAGTGATGAGTCTCCTTCCATATGAGGCTCGTTATCGCTTATATGGTGAGTGGGAAAAGGACGATGAGCGGAATCCTTTGCTGTTGGCAGCAAGGCAAGTGGCTAAGTTGGACACTAGATGGATTCTGAAACGGCTTGCAAAAGAAAATTTGAAGCCGTTAGGAAGGATGGTGGCAAAACTTGCGCATGCCAATCCCATGACGGTGCTTCGGACAATTGTGACTCAGATTGAAGCATACAGAGATATGATTGCTCCTGTTGTAGACGCCTTCAAGTACTTGACACAGCTCGAGTATGATATCCTGGAATATGTCGTGATTGAGAGACTGGTGCAAGGCGGACGAGCTAAACTCAAAGATGACGGGATTAATTTATCAGACTGGCTTCAATCTTTGGCTTCATTTTGGGGTCACCTGTGTAAGAAGTATCCATCAATGGAGTTAAGGGGTCTTTTCCAGTATCTCGTTAACCAGTTAAAGAGAGGCCAAGGGATTGAGCTTGTTCTTCTCCAGGAACTGATCCAGCAGATGGCAAATGTACAATACACTGAGAATCTTACTGAAGATCAGTTGGATGCCATGGCAGGAAGTGAGACATTACGTTATCACGCAACATCCTTTGGCATGACACGGAACAACAAGGCACTTGTCAAATCATCCAACCGTCTACGAGATTCGTTACTTCCAAATGATGAACCAAAGCTAGCTATCCCCCTTTTGTTACTTATCGCCCAGCATCGTTCTCTGGTTGTGGTAAATGCGGATGCACCCTACATTAAGATGGTCACTGAACAGTTCGACAGATGTCATGGAATTCTCCTCCAATACGTGGACTTTCTTTCTAGCGCTGTTACTCCTGCTACTGCTTATGCTCAGCTCGTACCTTCGCTTGAAGAGCTTGTTCATACATACCATCTTGAGCCAGAGGTCGCTTTTTTGGTATTTCGACCTGTGATGAGGCTCTTCAAATGTCGACGGAATGGTGATGTTTCATGGCCTTTGGACAGTGGGGAATCTATTGATGCAGATTCCGATGTATCAAAATCTGAGAGTTCCATGATTCTTGATGTCGGCACATCTGAAAAAGCTGTAACGTGGTCTGATGTTCTTGATACAGTAAGAACAATGCTGCCTTCGAAAGCTTGGAATAGTCTGTCGCCAGACCTCTACGCTACATTTTGGGGGCTTACTCTGTATGATCTCCATGTTCCCAGAAGTCGTTATGAGTCTGAGATATCTAAACAACATACTGCCCTTAAGACTCTTGAAGAGGTTGCTGATAATTCTAGCTCAGCAATTACGAAGAGAAAAAAAGAGAAGGAAAGGATTCAAGAATCTCTTGATCGTCTAACCGGTGAACTGAAAAAGCACGAAGAACATGTTGCCTCTGTCCGTAGAAGGCTTTCACGTGAAAAGGATAAATGGTTGAGCTCCTGTCCTGATACTTTGAAGATCAATATGGAGTTCCTGCAACGTTGTATTTTCCCTCGTTGCACATTTAGCATGGCAGATTCTGTGTACTGTGCTATGTTTGTACATATGCTCCACTCTCTTGGAACACCCTATTTTAACACAGTCAACCACATTGATGTACTGATATGTAAAACGCTACAACCGATGATCTGCTGCTGCACTGAATACGAGGTTGGAAGACTTGGGAGGTTTTTATTCGAGACCTTGAAGATTGCATACCACTGGAAGAGCGCAGAATCAATCTATGAAAGTGAGTGCGGAAACATGCCTGGGTTTGCTGTTTATTATAGATACCCGAACAGCCAGCGTGTCACATTTGGACAATTTGTGAAGGTACATTGGAAATGGTGTGCAAAAATCACAAAGCTTTTGATCCAATGTCTGGAGTCAAATGAGTACATGGAGATTCGTAATGCGCTAATAATGCTAACAAAAATATCTGGTGTTTTCCCAGTTACTCGGAAAACTGGATATAATATCGAGAAACGGGTAGCGAAAATTAAAAATGATGAGCGAGAGGACCTTAAGGTCTTGGCAACTGGTGTTGCCGCTGCTCTATCTGCAAGAAAATCATCATGGGTTACTGACGAAGAATTTGGCATGGGTTACCTTGAACTAAAGGCTCCGCCAGTACATACTCCTAAACATACTCCTTCCCAGAATGGCTTGGTAGGTGGTGAATCAACTGGGGGAAGATCTACTGCTAACCAGCAGCCTGAGTTTGGCGGCAAGGATCAGTTGTCAAAAACTAAAATACCAGATGGAAGAACGGAAAATATGCCTTCAAAATCTGATCAAGGACATCCAAAATCAAAGGGAGGCAATCCATCGGATGCCCAACCATCTATGTCTAAGAAACCAGTGGACCAAAAGGAAACAGATGAATCACCCAGGATATCTGATGAGAATCCTGTCAAAGCTGGTTCAAAGTACTCTGAAGCCGAGTTAAAACCTTCTTCTAAACGAGGTGCATCGGCTACGTCGACGAACAAATCAACAAAGCAAGATTTTGGAAAAGATGATGGAAAGTCCGGTAAAGCTGCTGGAAGAACATCCGCAGCTGATAACGATGTTATTTATCTGGGGAGCAGGCAAGCAAGTTTGACCAAAGCTTCTCCCAGCACAGCAGGCAATGGTAGCTTAGCTACTGGTTCGTCCAAAGTGAAAGATGATGGTGCTGAAGCTACAGATACTCAAAAGCAATCTACTCGGACTGCTCATTCCCCTAGGCATGAAATTAGCACTTCTTCGAGGTCGAGTGATAGGTTACAGAAACGAGCTAATGCTGTTGAAGATAGTGACAGAACAAGTAAACGCCGTAAAGCAGACTCTGAGCACAAAGAGCATGACAGTGAGGCTCGCCCGAGTGATAGAGACAGATCAGCAGAGGCTAGGGTGGATTTAAACAAAACACCCAGTGATGACCAAAGCACCCAGAGAGATCAAGACAGGGCAAAGGATAAGGGTAATGAAAGACAGGACCGAGACCACAGAGAAAGAGTCGAGCGTTCTGATAAAACTCGTGCAGATGATGCGGTAAAAGCACGAGACAAATCCATGGAACGTTATGGCAGAGAGCGGTCAGTTGAGAGGGGCCTTGATAAAGGAATAACTAGGAGTTACGATAGAAACAAGGATGAAAGAAGCAAAGATGACAGAAGCAAATTGCGTCATAGCGAGGCGTCACTTGAGAAAGCTCATGGTGATGATCGTTCTCTTTCTCAAGGCTTACCCCCACCTCCACCTCTACCTCCTAACATCGTTCCTCATTCTATGGCCTCGAAAGAAGAACCCGAAAGGAGGGCCGGAGTTACAAGGCATTCCCAGAGGCTTTCTCCGAGGCATGATGAAAGAGAGAGAAGACGCTCTGAAGAGAATACATCAGTTTCTGTTGAAGAATCAAAACGAAGAAGAGATGACGATTTTCGTGACCGTAAGCGAGATGACAGAGAAACAATCATTCTGAAGGGAGAAGAAAGGGAAAGAGGAAAGAGAAAGAGAAAAAAGTATCCCATTGAAAGATGA
Protein:  
MSLPLLECKYVTEEFVREGKSGSYGSKLPSSVPMLRFLYELCWVLVRGELPIQSCKAVLEKVKFLDDPSKEELASCFADVVTQIAQDLTMSGDHRSRLTKLAKWLVESQTVPQRIFQERCEEEFLWEAEMVKIKAQDLKGKEVRLNTRLLYQQTKFNLLREESEGYAKLITLLCRGSAGSSHNASAATMGIIKSLIGHFDLDPNRVFDIVLDCFELEQDYDTFLNLIPIFPKSHASQILGFKFQYYQRLEVNSPVPSGLYKLTALLVKKNFISLESIYAHLLPKDEEVFEDYNTYSAKRFEEANNIGKINLAATGKDLMEDEKQGDFKVDLYAALDMETEAVAERIPELENNQTLGLLDGFLSVDDWKHANIMFERLAPLNPVAHNHICDGLFRLIEKRITHAYRIARQTRFQNSSSASSEKIAHAANTSASKTCPDLKEVFQILVTVGPYLYRNTQLLQKICRLLRVYYLSSLDLVRSSDGSSNQEGSADEIKHLKEARFRVEEALGTCLLPSLQLIPANPAVGHEIWEVMSLLPYEARYRLYGEWEKDDERNPLLLAARQVAKLDTRWILKRLAKENLKPLGRMVAKLAHANPMTVLRTIVTQIEAYRDMIAPVVDAFKYLTQLEYDILEYVVIERLVQGGRAKLKDDGINLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKRGQGIELVLLQELIQQMANVQYTENLTEDQLDAMAGSETLRYHATSFGMTRNNKALVKSSNRLRDSLLPNDEPKLAIPLLLLIAQHRSLVVVNADAPYIKMVTEQFDRCHGILLQYVDFLSSAVTPATAYAQLVPSLEELVHTYHLEPEVAFLVFRPVMRLFKCRRNGDVSWPLDSGESIDADSDVSKSESSMILDVGTSEKAVTWSDVLDTVRTMLPSKAWNSLSPDLYATFWGLTLYDLHVPRSRYESEISKQHTALKTLEEVADNSSSAITKRKKEKERIQESLDRLTGELKKHEEHVASVRRRLSREKDKWLSSCPDTLKINMEFLQRCIFPRCTFSMADSVYCAMFVHMLHSLGTPYFNTVNHIDVLICKTLQPMICCCTEYEVGRLGRFLFETLKIAYHWKSAESIYESECGNMPGFAVYYRYPNSQRVTFGQFVKVHWKWCAKITKLLIQCLESNEYMEIRNALIMLTKISGVFPVTRKTGYNIEKRVAKIKNDEREDLKVLATGVAAALSARKSSWVTDEEFGMGYLELKAPPVHTPKHTPSQNGLVGGESTGGRSTANQQPEFGGKDQLSKTKIPDGRTENMPSKSDQGHPKSKGGNPSDAQPSMSKKPVDQKETDESPRISDENPVKAGSKYSEAELKPSSKRGASATSTNKSTKQDFGKDDGKSGKAAGRTSAADNDVIYLGSRQASLTKASPSTAGNGSLATGSSKVKDDGAEATDTQKQSTRTAHSPRHEISTSSRSSDRLQKRANAVEDSDRTSKRRKADSEHKEHDSEARPSDRDRSAEARVDLNKTPSDDQSTQRDQDRAKDKGNERQDRDHRERVERSDKTRADDAVKARDKSMERYGRERSVERGLDKGITRSYDRNKDERSKDDRSKLRHSEASLEKAHGDDRSLSQGLPPPPPLPPNIVPHSMASKEEPERRAGVTRHSQRLSPRHDERERRRSEENTSVSVEESKRRRDDDFRDRKRDDRETIILKGEERERGKRKRKKYPIER